The 8 Best Gluten-Free Pizza Spots in San Diego

Updated Jun 2025 for accuracy and safety

#1
Powerhaus Wholesome Pizza & Eats

Powerhaus Wholesome Pizza & Eats

1550 Garnet Ave, San Diego, California, United States

LunchDinnerBrunchVeganPizzaDeliveryTake AwayOutdoor SeatingKid Friendly
Gluten Free Icon

Celiac friendlyLow risk of cross-contamination

Trained staff

Dedicated kitchen space

Dedicated appliances

Always inquire directly about health and safety.
Gluten Free Menu Icon
GF options marked
Profile Image
Emily Louis

Great pizza. Gluten free or cauliflower crust options available. Fun hot honey to drizzle on top. Cute space. Parking in back. Lots of table games to play!

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#2
Pizza Nova

Pizza Nova

5050 N Harbor Dr, San Diego, California, United States

LunchDinnerBrunchPizzaDeliveryTake AwayOutdoor SeatingKid Friendly
Gluten Free Icon

AccommodatingSome risk of cross-contamination

Trained staff

Always inquire directly about health and safety.
Gluten Free Menu Icon
GF options marked
Profile Image
amanda anderson

Absolutely love this restaurant on the water. They have lots of choices of fresh made pizzas, salads, sandwiches and pasta dishes. They have gluten free and dairy free options including vegan cheese

Also featured in
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#3
TNT Pizza

TNT Pizza

550 14th St #116, San Diego, California, United States

LunchDinnerPizzaDeliveryTake AwayPet FriendlyOutdoor SeatingKid Friendly
Gluten Free Icon

AccommodatingSome risk of cross-contamination

Trained staff

Always inquire directly about health and safety.
Gluten Free Menu Icon
GF options marked
Profile Image
Daniel Ettinger

Did I mention the gluten free/vegan pizza was exceptional? The vibe of a pizza shop and service was great. I definitely will be going back.

Also featured in
San Diego's best 50 gluten free identity dev map locations
San Diego's best 50 Kid Friendly locations
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#4
Sisters Pizza

Sisters Pizza

3603 Fourth Ave, San Diego, California, United States

LunchDinnerPizzaDeliveryTake AwayOutdoor SeatingKid Friendly
Gluten Free Icon

Gluten-free optionsSuggested by the GF community

Always inquire directly about health and safety.
Gluten Free Menu Icon
GF options marked
Profile Image
Linda Berger

Wonderfully flavorful and fresh salads. The gluten free pizza crust is incredible and the sauce and toppings were perfect.

Also featured in
San Diego's best 50 Kid Friendly locations
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#5
Rizers Pizza

Rizers Pizza

1459 Garnet Ave, San Diego, California, United States

LunchDinnerOpen LatePizzaDeliveryTake AwayKid Friendly
Gluten Free Icon

Gluten-free optionsSuggested by the GF community

Always inquire directly about health and safety.
Gluten Free Menu Icon
GF options marked
Profile Image
Abbey Baslock-Bechler Smith

Delicious gluten free pizza!! Made to order. I’m sensitive to cross contamination and didn’t have a problem. Nice folks working there.

Also featured in
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#6
Landini's Pizzeria

Landini's Pizzeria

1827 India St, San Diego, California, United States

LunchDinnerBrunchOpen LateItalianPizzaDeliveryTake AwayPet FriendlyOutdoor SeatingKid Friendly
Gluten Free Icon

AccommodatingSome risk of cross-contamination

Trained staff

Always inquire directly about health and safety.
Gluten Free Menu Icon
GF options marked
Profile Image
A Universal Woman

Legit new york style pizzeria in the heart of Little Italy San Diego. Full meal for under $12. THANK YOU!!! Lots of seating inside and out. I dream of their new Hot Honey Ricotta Pie. Their meat pizzas and even their vegan and gluten free pizza are so yummy!!! Beer selection and wine are great too. They have a big sign saying ' Welcome Pizza Lovers'. Hahaha I guess I'm welcome here!

Also featured in
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#7
HillCrust Pizza

HillCrust Pizza

127 University Ave, San Diego, California, United States

LunchDinnerPizzaDeliveryTake AwayOutdoor SeatingKid Friendly
Gluten Free Icon

Gluten-free optionsSuggested by the GF community

Always inquire directly about health and safety.
Gluten Free Menu Icon
GF options marked
#8
Sauced Pizzeria

Sauced Pizzeria

4475 Ingraham St, San Diego, California, United States

LunchDinnerItalianPizzaDeliveryTake AwayKid Friendly
Gluten Free Icon

Gluten-free optionsSuggested by the GF community

Always inquire directly about health and safety.
Gluten Free Menu Icon
GF options marked
Also featured in
San Diego's best 13 Italian locations
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